WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105E8A.25g Sequence Name  Y105E8A.25g
Length (nt)  4221   Chromosome Location  I: 14567368-14567497
Chromosome . Primary Identifier  I Chromosome Location . Start  14567368
Chromosome Location . End  14567497
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.25g

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50213 RHGF-3, isoform g 155.4 1406 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00000659
WBRNAi00055228
WBRNAi00055229
WBRNAi00026558
WBRNAi00085702
WBRNAi00007466
WBRNAi00004487
WBRNAi00036495
WBRNAi00026559

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105E8A.25g 14567368 14567497 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013682 rhgf-3 Y105E8A.25 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105E8A.25g 14567368 14567497 -1
CDS:Y105E8A.25g 14570053 14570364 -1
CDS:Y105E8A.25g 14571439 14571778 -1
CDS:Y105E8A.25g 14572719 14572940 -1
CDS:Y105E8A.25g 14575108 14575299 -1
CDS:Y105E8A.25g 14576119 14576617 -1
CDS:Y105E8A.25g 14577880 14578568 -1
CDS:Y105E8A.25g 14579082 14579200 -1
CDS:Y105E8A.25g 14579463 14579574 -1
CDS:Y105E8A.25g 14585522 14585612 -1
CDS:Y105E8A.25g 14586781 14586885 -1
CDS:Y105E8A.25g 14587067 14587139 -1
CDS:Y105E8A.25g 14590706 14590812 -1
CDS:Y105E8A.25g 14592095 14592252 -1
CDS:Y105E8A.25g 14593328 14593571 -1
CDS:Y105E8A.25g 14595998 14596350 -1
CDS:Y105E8A.25g 14600191 14600287 -1
CDS:Y105E8A.25g 14602064 14602204 -1
CDS:Y105E8A.25g 14602262 14602332 -1
CDS:Y105E8A.25g 14602593 14602758 -1

1 Sequence

Length
4221

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105E8A.25g.1 Y105E8A.25g.1 4417   I: 14567368-14604138