WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C09E8.1a Sequence Name  C09E8.1a
Length (nt)  2352   Chromosome Location  II: 556552-556640
Chromosome . Primary Identifier  II Chromosome Location . Start  556552
Chromosome Location . End  556640
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09E8.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31299 C09E8.1, isoform a 88.7 783 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00040199
WBRNAi00022279
WBRNAi00033386

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C09E8.1a 556552 556640 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015644 C09E8.1 C09E8.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:C09E8.1a 556552 556640 1
CDS:C09E8.1a 557024 557142 1
CDS:C09E8.1a 557303 557448 1
CDS:C09E8.1a 557502 557593 1
CDS:C09E8.1a 558200 558551 1
CDS:C09E8.1a 558604 558735 1
CDS:C09E8.1a 559306 559512 1
CDS:C09E8.1a 559559 559687 1
CDS:C09E8.1a 560031 560121 1
CDS:C09E8.1a 560169 560305 1
CDS:C09E8.1a 561834 562052 1
CDS:C09E8.1a 562538 562860 1
CDS:C09E8.1a 563115 563242 1
CDS:C09E8.1a 563788 563975 1

1 Sequence

Length
2352

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C09E8.1a.1 C09E8.1a.1 2505   II: 556485-564061