WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09B6.1c.1 Sequence Name  W09B6.1c.1
Length (nt)  6498   Chromosome Location  II: 1136801-1152375
Chromosome . Primary Identifier  II Chromosome Location . Start  1136801
Chromosome Location . End  1152375 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09B6.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004076 pod-2 W09B6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09B6.1c W09B6.1c 6498   II: 1136801-1136858

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09B6.1c.1 1136801 1152375 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40384   58   II: 1136801-1136858 Caenorhabditis elegans
Exon40386   99   II: 1136949-1137047 Caenorhabditis elegans
Exon40389   148   II: 1140342-1140489 Caenorhabditis elegans
Exon40397   82   II: 1143908-1143989 Caenorhabditis elegans
Exon40405   96   II: 1144549-1144644 Caenorhabditis elegans
Exon40411   139   II: 1144920-1145058 Caenorhabditis elegans
Exon40417   1912   II: 1145655-1147566 Caenorhabditis elegans
Exon40422   178   II: 1147821-1147998 Caenorhabditis elegans
Exon40427   3545   II: 1148354-1151898 Caenorhabditis elegans
Exon40433   186   II: 1152017-1152202 Caenorhabditis elegans
Exon40435   55   II: 1152321-1152375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09B6.1c.1 1136801 1152375 1

1 Sequence

Length
6498

1 Sequence Ontology Term

Identifier Name Description
transcript