WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F18A12.8a Sequence Name  F18A12.8a
Length (nt)  2547   Chromosome Location  II: 3421002-3421178
Chromosome . Primary Identifier  II Chromosome Location . Start  3421002
Chromosome Location . End  3421178
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18A12.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23669 NEP-11, isoform a 97.0 848 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00044929
WBRNAi00013496
WBRNAi00031096
WBRNAi00089044

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F18A12.8a 3421002 3421178 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017557 nep-11 F18A12.8 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F18A12.8a 3421002 3421178 -1
CDS:F18A12.8a 3421283 3421447 -1
CDS:F18A12.8a 3421668 3421918 -1
CDS:F18A12.8a 3421965 3422130 -1
CDS:F18A12.8a 3422375 3422998 -1
CDS:F18A12.8a 3423215 3423316 -1
CDS:F18A12.8a 3423362 3423466 -1
CDS:F18A12.8a 3423514 3423694 -1
CDS:F18A12.8a 3423743 3423999 -1
CDS:F18A12.8a 3424413 3424760 -1
CDS:F18A12.8a 3424811 3424877 -1
CDS:F18A12.8a 3425429 3425532 -1

1 Sequence

Length
2547

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F18A12.8a.1 F18A12.8a.1 2887   II: 3420663-3425533