WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44B7.2a.2 Sequence Name  C44B7.2a.2
Length (nt)  2026   Chromosome Location  II: 6898729-6901804
Chromosome . Primary Identifier  II Chromosome Location . Start  6898729
Chromosome Location . End  6901804 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44B7.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016624 hrpl-1 C44B7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44B7.2a C44B7.2a 1794   II: 6898751-6898779

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44B7.2a.2 6898729 6901804 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54904   51   II: 6898729-6898779 Caenorhabditis elegans
Exon54908   97   II: 6898830-6898926 Caenorhabditis elegans
Exon54911   165   II: 6898972-6899136 Caenorhabditis elegans
Exon54914   303   II: 6899438-6899740 Caenorhabditis elegans
Exon54917   61   II: 6899790-6899850 Caenorhabditis elegans
Exon54920   60   II: 6900219-6900278 Caenorhabditis elegans
Exon54923   203   II: 6900325-6900527 Caenorhabditis elegans
Exon54926   93   II: 6900579-6900671 Caenorhabditis elegans
Exon54929   489   II: 6900715-6901203 Caenorhabditis elegans
Exon54931   130   II: 6901256-6901385 Caenorhabditis elegans
Exon54933   374   II: 6901431-6901804 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44B7.2a.2 6898729 6901804 1

1 Sequence

Length
2026

1 Sequence Ontology Term

Identifier Name Description
transcript