WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C44B7.2a Sequence Name  C44B7.2a
Length (nt)  1794   Chromosome Location  II: 6898751-6898779
Chromosome . Primary Identifier  II Chromosome Location . Start  6898751
Chromosome Location . End  6898779
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44B7.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34752 HRPL-1, isoform a 66.5 597 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00042426
WBRNAi00042427
WBRNAi00011909
WBRNAi00076213
WBRNAi00102169
WBRNAi00061751
WBRNAi00062160
WBRNAi00033365

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C44B7.2a 6898751 6898779 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016624 hrpl-1 C44B7.2 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:C44B7.2a 6898751 6898779 1
CDS:C44B7.2a 6898830 6898926 1
CDS:C44B7.2a 6898972 6899136 1
CDS:C44B7.2a 6899438 6899740 1
CDS:C44B7.2a 6899790 6899850 1
CDS:C44B7.2a 6900219 6900278 1
CDS:C44B7.2a 6900325 6900527 1
CDS:C44B7.2a 6900579 6900671 1
CDS:C44B7.2a 6900715 6901203 1
CDS:C44B7.2a 6901256 6901385 1
CDS:C44B7.2a 6901431 6901594 1

1 Sequence

Length
1794

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C44B7.2a.2 C44B7.2a.2 2026   II: 6898729-6901804
Transcript:C44B7.2a.1 C44B7.2a.1 1921   II: 6898736-6901722