WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F22D3.1d Sequence Name  F22D3.1d
Length (nt)  1941   Chromosome Location  II: 6952070-6952107
Chromosome . Primary Identifier  II Chromosome Location . Start  6952070
Chromosome Location . End  6952107
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22D3.1d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52001 CEH-38, isoform d 71.5 646 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00045305
WBRNAi00008194
WBRNAi00031264
WBRNAi00084577

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F22D3.1d 6952070 6952107 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000459 ceh-38 F22D3.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F22D3.1d 6952070 6952107 1
CDS:F22D3.1d 6952153 6952464 1
CDS:F22D3.1d 6952513 6952615 1
CDS:F22D3.1d 6952744 6953059 1
CDS:F22D3.1d 6953182 6953668 1
CDS:F22D3.1d 6953783 6954029 1
CDS:F22D3.1d 6954163 6954249 1
CDS:F22D3.1d 6954379 6954729 1

1 Sequence

Length
1941

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F22D3.1d.2 F22D3.1d.2 2865   II: 6951526-6955408
Transcript:F22D3.1d.1 F22D3.1d.1 2686   II: 6952004-6955408