WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C15F1.3a Sequence Name  C15F1.3a
Length (nt)  4428   Chromosome Location  II: 6955619-6956383
Chromosome . Primary Identifier  II Chromosome Location . Start  6955619
Chromosome Location . End  6956383
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15F1.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23546 TRA-2, isoform a 170.3 1475 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00067242
WBRNAi00067304
WBRNAi00067314
WBRNAi00067754
WBRNAi00067870
WBRNAi00040609
WBRNAi00040610
WBRNAi00024564
WBRNAi00008399
WBRNAi00077789
WBRNAi00071853
WBRNAi00028920
WBRNAi00071159
WBRNAi00062008
WBRNAi00065695

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C15F1.3a 6955619 6956383 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006605 tra-2 C15F1.3 Caenorhabditis elegans

23 Locations


Feature . Primary Identifier
Start End Strand
CDS:C15F1.3a 6955619 6956383 -1
CDS:C15F1.3a 6956433 6956816 -1
CDS:C15F1.3a 6956957 6957105 -1
CDS:C15F1.3a 6958952 6959119 -1
CDS:C15F1.3a 6959165 6959267 -1
CDS:C15F1.3a 6959313 6959421 -1
CDS:C15F1.3a 6961573 6961667 -1
CDS:C15F1.3a 6962012 6962191 -1
CDS:C15F1.3a 6962354 6962427 -1
CDS:C15F1.3a 6962476 6962576 -1
CDS:C15F1.3a 6962622 6962716 -1
CDS:C15F1.3a 6962762 6962839 -1
CDS:C15F1.3a 6962892 6962988 -1
CDS:C15F1.3a 6963048 6963162 -1
CDS:C15F1.3a 6963214 6963477 -1
CDS:C15F1.3a 6963536 6963671 -1
CDS:C15F1.3a 6963721 6964401 -1
CDS:C15F1.3a 6964456 6964587 -1
CDS:C15F1.3a 6964643 6964755 -1
CDS:C15F1.3a 6964811 6965006 -1
CDS:C15F1.3a 6965057 6965153 -1
CDS:C15F1.3a 6965204 6965316 -1
CDS:C15F1.3a 6965491 6965673 -1

1 Sequence

Length
4428

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C15F1.3a.1 C15F1.3a.1 4663   II: 6955384-6965673