WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52E12.2b.1 Sequence Name  C52E12.2b.1
Length (nt)  5502   Chromosome Location  II: 6994987-7010624
Chromosome . Primary Identifier  II Chromosome Location . Start  6994987
Chromosome Location . End  7010624 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52E12.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006831 unc-104 C52E12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52E12.2b C52E12.2b 4887   II: 6995934-6996033

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C52E12.2b.1 6994987 7010624 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55470   200   II: 6994987-6995186 Caenorhabditis elegans
Exon55474   100   II: 6995934-6996033 Caenorhabditis elegans
Exon55477   151   II: 6996558-6996708 Caenorhabditis elegans
Exon55480   169   II: 6996756-6996924 Caenorhabditis elegans
Exon55483   179   II: 6996975-6997153 Caenorhabditis elegans
Exon55489   256   II: 7001721-7001976 Caenorhabditis elegans
Exon55492   161   II: 7002305-7002465 Caenorhabditis elegans
Exon55495   453   II: 7002514-7002966 Caenorhabditis elegans
Exon55501   269   II: 7003394-7003662 Caenorhabditis elegans
Exon55504   155   II: 7003710-7003864 Caenorhabditis elegans
Exon55507   121   II: 7003912-7004032 Caenorhabditis elegans
Exon55510   199   II: 7004303-7004501 Caenorhabditis elegans
Exon55513   132   II: 7004659-7004790 Caenorhabditis elegans
Exon55514   141   II: 7005976-7006116 Caenorhabditis elegans
Exon55517   223   II: 7006470-7006692 Caenorhabditis elegans
Exon55520   136   II: 7006843-7006978 Caenorhabditis elegans
Exon55523   121   II: 7007026-7007146 Caenorhabditis elegans
Exon55526   148   II: 7007194-7007341 Caenorhabditis elegans
Exon55529   161   II: 7007388-7007548 Caenorhabditis elegans
Exon55530   626   II: 7007769-7008394 Caenorhabditis elegans
Exon55535   288   II: 7008625-7008912 Caenorhabditis elegans
Exon55538   133   II: 7009153-7009285 Caenorhabditis elegans
Exon55541   445   II: 7009332-7009776 Caenorhabditis elegans
Exon55543   535   II: 7010090-7010624 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C52E12.2b.1 6994987 7010624 1

1 Sequence

Length
5502

1 Sequence Ontology Term

Identifier Name Description
transcript