WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E12.1a.2 Sequence Name  F45E12.1a.2
Length (nt)  1396   Chromosome Location  II: 7311480-7313875
Chromosome . Primary Identifier  II Chromosome Location . Start  7311480
Chromosome Location . End  7313875 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E12.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018474 cnep-1 F45E12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E12.1a F45E12.1a 741   II: 7311516-7311602

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45E12.1a.2 7311480 7313875 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56624   123   II: 7311480-7311602 Caenorhabditis elegans
Exon56628   70   II: 7311649-7311718 Caenorhabditis elegans
Exon56631   119   II: 7312099-7312217 Caenorhabditis elegans
Exon56634   83   II: 7312265-7312347 Caenorhabditis elegans
Exon56637   93   II: 7312394-7312486 Caenorhabditis elegans
Exon56640   125   II: 7312842-7312966 Caenorhabditis elegans
Exon56644   783   II: 7313093-7313875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45E12.1a.2 7311480 7313875 1

1 Sequence

Length
1396

1 Sequence Ontology Term

Identifier Name Description
transcript