WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK1290.4a Sequence Name  ZK1290.4a
Length (nt)  2424   Chromosome Location  II: 7538280-7538297
Chromosome . Primary Identifier  II Chromosome Location . Start  7538280
Chromosome Location . End  7538297
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1290.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37597 NFI-1, isoform a 87.8 807 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00059213
WBRNAi00008274
WBRNAi00021867
WBRNAi00024297
WBRNAi00075897

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK1290.4a 7538280 7538297 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003592 nfi-1 ZK1290.4 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK1290.4a 7538280 7538297 1
CDS:ZK1290.4a 7538700 7538840 1
CDS:ZK1290.4a 7538889 7538963 1
CDS:ZK1290.4a 7539019 7539099 1
CDS:ZK1290.4a 7539155 7539253 1
CDS:ZK1290.4a 7539309 7539440 1
CDS:ZK1290.4a 7539497 7539851 1
CDS:ZK1290.4a 7540267 7540525 1
CDS:ZK1290.4a 7540575 7540870 1
CDS:ZK1290.4a 7540913 7541050 1
CDS:ZK1290.4a 7541315 7541447 1
CDS:ZK1290.4a 7541495 7541781 1
CDS:ZK1290.4a 7541831 7541978 1
CDS:ZK1290.4a 7542159 7542258 1
CDS:ZK1290.4a 7542377 7542538 1

1 Sequence

Length
2424

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK1290.4a.1 ZK1290.4a.1 2993   II: 7538180-7543007