WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:M110.4a Sequence Name  M110.4a
Length (nt)  3471   Chromosome Location  II: 8217254-8217302
Chromosome . Primary Identifier  II Chromosome Location . Start  8217254
Chromosome Location . End  8217302
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M110.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02277 IFG-1, isoform a 129.3 1156 Caenorhabditis elegans
 

Other

87 RNAi

WormBase ID
WBRNAi00075699
WBRNAi00066209
WBRNAi00009010
WBRNAi00097409
WBRNAi00085422
WBRNAi00082159
WBRNAi00001710
WBRNAi00050945
WBRNAi00107938
WBRNAi00106788
WBRNAi00107937
WBRNAi00034446
WBRNAi00097408
WBRNAi00088473
WBRNAi00088477
WBRNAi00088483
WBRNAi00088487
WBRNAi00088489
WBRNAi00088497
WBRNAi00092786
WBRNAi00092788
WBRNAi00092789
WBRNAi00092798
WBRNAi00075658
WBRNAi00075662
WBRNAi00075661
WBRNAi00075664
WBRNAi00075682
WBRNAi00075684
WBRNAi00075686

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M110.4a 8217254 8217302 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002066 ifg-1 M110.4 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:M110.4a 8217254 8217302 1
CDS:M110.4a 8217357 8217438 1
CDS:M110.4a 8217483 8217599 1
CDS:M110.4a 8217745 8218837 1
CDS:M110.4a 8218892 8219095 1
CDS:M110.4a 8219147 8220113 1
CDS:M110.4a 8220167 8220737 1
CDS:M110.4a 8220784 8221009 1
CDS:M110.4a 8221081 8221242 1

1 Sequence

Length
3471

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M110.4a.1 M110.4a.1 4517   II: 8217231-8222265