WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M106.4a.1 Sequence Name  M106.4a.1
Length (nt)  2868   Chromosome Location  II: 10863679-10868720
Chromosome . Primary Identifier  II Chromosome Location . Start  10863679
Chromosome Location . End  10868720 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M106.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010912 gmps-1 M106.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M106.4a M106.4a 2232   II: 10864192-10864296

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M106.4a.1 10863679 10868720 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67266   618   II: 10863679-10864296 Caenorhabditis elegans
Exon67271   549   II: 10864348-10864896 Caenorhabditis elegans
Exon67276   590   II: 10864951-10865540 Caenorhabditis elegans
Exon67281   360   II: 10865589-10865948 Caenorhabditis elegans
Exon67286   513   II: 10866091-10866603 Caenorhabditis elegans
Exon67292   61   II: 10866728-10866788 Caenorhabditis elegans
Exon67299   99   II: 10868338-10868436 Caenorhabditis elegans
Exon67304   78   II: 10868643-10868720 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M106.4a.1 10863679 10868720 -1

1 Sequence

Length
2868

1 Sequence Ontology Term

Identifier Name Description
transcript