WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M106.4a Sequence Name  M106.4a
Length (nt)  2232   Chromosome Location  II: 10864192-10864296
Chromosome . Primary Identifier  II Chromosome Location . Start  10864192
Chromosome Location . End  10864296
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M106.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47006 GMPS-1, isoform a 82.4 743 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00001862
WBRNAi00050940
WBRNAi00017198

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M106.4a 10864192 10864296 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010912 gmps-1 M106.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:M106.4a 10864192 10864296 -1
CDS:M106.4a 10864348 10864896 -1
CDS:M106.4a 10864951 10865540 -1
CDS:M106.4a 10865589 10865948 -1
CDS:M106.4a 10866091 10866603 -1
CDS:M106.4a 10866728 10866788 -1
CDS:M106.4a 10868338 10868391 -1

1 Sequence

Length
2232

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M106.4a.1 M106.4a.1 2868   II: 10863679-10868720
Transcript:M106.4a.2 M106.4a.2 2872   II: 10863681-10868720