WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T06D8.1j Sequence Name  T06D8.1j
Length (nt)  10584   Chromosome Location  II: 11203822-11203948
Chromosome . Primary Identifier  II Chromosome Location . Start  11203822
Chromosome Location . End  11203948
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06D8.1j

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53993 SRAP-1, isoform j 363.8 3527 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00000276
WBRNAi00052642

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T06D8.1j 11203822 11203948 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011522 srap-1 T06D8.1 Caenorhabditis elegans

24 Locations


Feature . Primary Identifier
Start End Strand
CDS:T06D8.1j 11203822 11203948 1
CDS:T06D8.1j 11206666 11206866 1
CDS:T06D8.1j 11207002 11207091 1
CDS:T06D8.1j 11207472 11207594 1
CDS:T06D8.1j 11207650 11207721 1
CDS:T06D8.1j 11208446 11208532 1
CDS:T06D8.1j 11208730 11208808 1
CDS:T06D8.1j 11208872 11209044 1
CDS:T06D8.1j 11209127 11209363 1
CDS:T06D8.1j 11209462 11209580 1
CDS:T06D8.1j 11209647 11209788 1
CDS:T06D8.1j 11209842 11210366 1
CDS:T06D8.1j 11210415 11210903 1
CDS:T06D8.1j 11210951 11212012 1
CDS:T06D8.1j 11212146 11217886 1
CDS:T06D8.1j 11217935 11218057 1
CDS:T06D8.1j 11218100 11218213 1
CDS:T06D8.1j 11218265 11218367 1
CDS:T06D8.1j 11218450 11218494 1
CDS:T06D8.1j 11218627 11218914 1
CDS:T06D8.1j 11219458 11219541 1
CDS:T06D8.1j 11219589 11219719 1
CDS:T06D8.1j 11219762 11219924 1
CDS:T06D8.1j 11219973 11220238 1

1 Sequence

Length
10584

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T06D8.1j.1 T06D8.1j.1 10584   II: 11203822-11220238