WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00000276 Remark  yk154c2
Secondary Identifier  SA:yk154c2

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011522 srap-1 T06D8.1 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D8.1a T06D8.1a 10599   II: 11203822-11203948
CDS:T06D8.1e T06D8.1e 9999   II: 11203822-11203948
CDS:T06D8.1c T06D8.1c 10266   II: 11203822-11203948
CDS:T06D8.1d T06D8.1d 10368   II: 11203822-11203948
CDS:T06D8.1f T06D8.1f 10332   II: 11203822-11203948
CDS:T06D8.1j T06D8.1j 10584   II: 11203822-11203948
CDS:T06D8.1k T06D8.1k 10020   II: 11203822-11203948
CDS:T06D8.1b T06D8.1b 10035   II: 11203822-11203948
CDS:T06D8.1g T06D8.1g 9768   II: 11203822-11203948
CDS:T06D8.1h T06D8.1h 10101   II: 11203822-11203948
CDS:T06D8.1i T06D8.1i 10251   II: 11203822-11203948
CDS:T06D8.1l T06D8.1l 10353   II: 11203822-11203948

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain