WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50E10.5.1 Sequence Name  C50E10.5.1
Length (nt)  1086   Chromosome Location  II: 12335730-12338093
Chromosome . Primary Identifier  II Chromosome Location . Start  12335730
Chromosome Location . End  12338093 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50E10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016828 sre-52 C50E10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50E10.5 C50E10.5 1086   II: 12335730-12336202

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50E10.5.1 12335730 12338093 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71379   473   II: 12335730-12336202 Caenorhabditis elegans
Exon71380   157   II: 12336754-12336910 Caenorhabditis elegans
Exon71381   129   II: 12336976-12337104 Caenorhabditis elegans
Exon71382   134   II: 12337717-12337850 Caenorhabditis elegans
Exon71383   193   II: 12337901-12338093 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50E10.5.1 12335730 12338093 1

1 Sequence

Length
1086

1 Sequence Ontology Term

Identifier Name Description
transcript