WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y46G5A.1b Sequence Name  Y46G5A.1b
Length (nt)  3030   Chromosome Location  II: 12694453-12694538
Chromosome . Primary Identifier  II Chromosome Location . Start  12694453
Chromosome Location . End  12694538
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46990 TBC-17, isoform b 112.8 1009 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056667
WBRNAi00020648
WBRNAi00037125
WBRNAi00002323
WBRNAi00103595

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y46G5A.1b 12694453 12694538 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012894 tbc-17 Y46G5A.1 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y46G5A.1b 12694453 12694538 1
CDS:Y46G5A.1b 12694765 12694945 1
CDS:Y46G5A.1b 12696129 12696448 1
CDS:Y46G5A.1b 12697088 12697371 1
CDS:Y46G5A.1b 12698776 12699064 1
CDS:Y46G5A.1b 12700617 12700797 1
CDS:Y46G5A.1b 12701656 12701725 1
CDS:Y46G5A.1b 12716760 12716931 1
CDS:Y46G5A.1b 12716992 12717342 1
CDS:Y46G5A.1b 12717825 12718252 1
CDS:Y46G5A.1b 12718769 12718893 1
CDS:Y46G5A.1b 12719964 12720111 1
CDS:Y46G5A.1b 12721100 12721266 1
CDS:Y46G5A.1b 12721816 12721915 1
CDS:Y46G5A.1b 12723583 12723710 1

1 Sequence

Length
3030

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y46G5A.1b.1 Y46G5A.1b.1 3490   II: 12694453-12725480