WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y46G5A.29 Sequence Name  Y46G5A.29
Length (nt)  2271   Chromosome Location  II: 12856220-12856338
Chromosome . Primary Identifier  II Chromosome Location . Start  12856220
Chromosome Location . End  12856338
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.29

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44491 Y46G5A.29 85.7 756 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056688
WBRNAi00020655

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y46G5A.29 12856220 12856338 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012917 Y46G5A.29 Y46G5A.29 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y46G5A.29 12856220 12856338 1
CDS:Y46G5A.29 12857040 12857167 1
CDS:Y46G5A.29 12857220 12857348 1
CDS:Y46G5A.29 12857394 12857520 1
CDS:Y46G5A.29 12857592 12858003 1
CDS:Y46G5A.29 12858376 12858562 1
CDS:Y46G5A.29 12858618 12858842 1
CDS:Y46G5A.29 12858897 12859007 1
CDS:Y46G5A.29 12859306 12859416 1
CDS:Y46G5A.29 12859460 12859600 1
CDS:Y46G5A.29 12859643 12859838 1
CDS:Y46G5A.29 12861462 12861846 1

1 Sequence

Length
2271

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y46G5A.29.1 Y46G5A.29.1 2503   II: 12856200-12862058