WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54F10AM.4.1 Sequence Name  Y54F10AM.4.1
Length (nt)  4213   Chromosome Location  III: 2530620-2543068
Chromosome . Primary Identifier  III Chromosome Location . Start  2530620
Chromosome Location . End  2543068 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54F10AM.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000464 ceh-44 Y54F10AM.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54F10AM.4 Y54F10AM.4 3822   III: 2530620-2530670

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54F10AM.4.1 2530620 2543068 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81411   51   III: 2530620-2530670 Caenorhabditis elegans
Exon81416   111   III: 2530714-2530824 Caenorhabditis elegans
Exon81419   127   III: 2533823-2533949 Caenorhabditis elegans
Exon81422   200   III: 2536399-2536598 Caenorhabditis elegans
Exon81425   261   III: 2537186-2537446 Caenorhabditis elegans
Exon81428   308   III: 2538493-2538800 Caenorhabditis elegans
Exon81431   164   III: 2539300-2539463 Caenorhabditis elegans
Exon81432   131   III: 2539676-2539806 Caenorhabditis elegans
Exon81433   546   III: 2539863-2540408 Caenorhabditis elegans
Exon81434   984   III: 2540470-2541453 Caenorhabditis elegans
Exon81435   1330   III: 2541739-2543068 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54F10AM.4.1 2530620 2543068 1

1 Sequence

Length
4213

1 Sequence Ontology Term

Identifier Name Description
transcript