WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54F10AM.4 Sequence Name  Y54F10AM.4
Length (nt)  3822   Chromosome Location  III: 2530620-2530670
Chromosome . Primary Identifier  III Chromosome Location . Start  2530620
Chromosome Location . End  2530670
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54F10AM.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27288 CEH-44 143.5 1273 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00057401
WBRNAi00107381
WBRNAi00106736

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y54F10AM.4 2530620 2530670 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000464 ceh-44 Y54F10AM.4 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y54F10AM.4 2530620 2530670 1
CDS:Y54F10AM.4 2530714 2530824 1
CDS:Y54F10AM.4 2533823 2533949 1
CDS:Y54F10AM.4 2536399 2536598 1
CDS:Y54F10AM.4 2537186 2537446 1
CDS:Y54F10AM.4 2538493 2538800 1
CDS:Y54F10AM.4 2539300 2539463 1
CDS:Y54F10AM.4 2539676 2539806 1
CDS:Y54F10AM.4 2539863 2540408 1
CDS:Y54F10AM.4 2540470 2541453 1
CDS:Y54F10AM.4 2541739 2542677 1

1 Sequence

Length
3822

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54F10AM.4.1 Y54F10AM.4.1 4213   III: 2530620-2543068