WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55D5A.5g.1 Sequence Name  Y55D5A.5g.1
Length (nt)  2019   Chromosome Location  III: 2995919-3001312
Chromosome . Primary Identifier  III Chromosome Location . Start  2995919
Chromosome Location . End  3001312 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55D5A.5g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000898 daf-2 Y55D5A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55D5A.5g Y55D5A.5g 2019   III: 2995919-2996014

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55D5A.5g.1 2995919 3001312 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82198   96   III: 2995919-2996014 Caenorhabditis elegans
Exon82208   276   III: 2997060-2997335 Caenorhabditis elegans
Exon82215   186   III: 2998662-2998847 Caenorhabditis elegans
Exon82217   1461   III: 2999852-3001312 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55D5A.5g.1 2995919 3001312 -1

1 Sequence

Length
2019

1 Sequence Ontology Term

Identifier Name Description
transcript