WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55D5A.5f Sequence Name  Y55D5A.5f
Length (nt)  3111   Chromosome Location  III: 2995919-2996014
Chromosome . Primary Identifier  III Chromosome Location . Start  2995919
Chromosome Location . End  2996014
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55D5A.5f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50215 DAF-2, isoform f 115.2 1036 Caenorhabditis elegans
 

Other

63 RNAi

WormBase ID
WBRNAi00066317
WBRNAi00078887
WBRNAi00078669
WBRNAi00098396
WBRNAi00057515
WBRNAi00062551
WBRNAi00063123
WBRNAi00069849
WBRNAi00069848
WBRNAi00069850
WBRNAi00113592
WBRNAi00092438
WBRNAi00084308
WBRNAi00089387
WBRNAi00095301
WBRNAi00095355
WBRNAi00098395
WBRNAi00098397
WBRNAi00098354
WBRNAi00098353
WBRNAi00098402
WBRNAi00098401
WBRNAi00107943
WBRNAi00117265
WBRNAi00066316
WBRNAi00066319
WBRNAi00079036
WBRNAi00092436
WBRNAi00092435
WBRNAi00102861

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y55D5A.5f 2995919 2996014 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000898 daf-2 Y55D5A.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y55D5A.5f 2995919 2996014 -1
CDS:Y55D5A.5f 2997060 2997335 -1
CDS:Y55D5A.5f 2998662 2998847 -1
CDS:Y55D5A.5f 2999852 3001382 -1
CDS:Y55D5A.5f 3004566 3004900 -1
CDS:Y55D5A.5f 3005692 3006037 -1
CDS:Y55D5A.5f 3008610 3008892 -1
CDS:Y55D5A.5f 3010411 3010468 -1

1 Sequence

Length
3111

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55D5A.5f.1 Y55D5A.5f.1 3111   III: 2995919-3010468