WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:Y55D5A.5b Sequence Name  Y55D5A.5b
Length (nt)  6728   Chromosome Location  III: 2995919-3028702
Chromosome . Primary Identifier  III Chromosome Location . Start  2995919
Chromosome Location . End  3028702 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55D5A.5b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000898 daf-2 Y55D5A.5 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55D5A.5b 2995919 3028702 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82202   96   III: 2995919-2996014 Caenorhabditis elegans
Exon82209   276   III: 2997060-2997335 Caenorhabditis elegans
Exon82216   186   III: 2998662-2998847 Caenorhabditis elegans
Exon82223   1531   III: 2999852-3001382 Caenorhabditis elegans
Exon82229   335   III: 3004566-3004900 Caenorhabditis elegans
Exon82235   1533   III: 3005692-3007224 Caenorhabditis elegans
Exon82242   283   III: 3008610-3008892 Caenorhabditis elegans
Exon82248   113   III: 3010411-3010523 Caenorhabditis elegans
Exon82253   1393   III: 3012186-3013578 Caenorhabditis elegans
Exon82258   169   III: 3014588-3014756 Caenorhabditis elegans
Exon82263   106   III: 3015363-3015468 Caenorhabditis elegans
Exon82268   177   III: 3016166-3016342 Caenorhabditis elegans
Exon82273   122   III: 3016921-3017042 Caenorhabditis elegans
Exon82278   132   III: 3019170-3019301 Caenorhabditis elegans
Exon82283   115   III: 3019559-3019673 Caenorhabditis elegans
Exon82287   97   III: 3023078-3023174 Caenorhabditis elegans
Exon82288   64   III: 3028639-3028702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55D5A.5b 2995919 3028702 -1

1 Sequence

Length
6728

1 Sequence Ontology Term

Identifier Name Description
transcript