WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10E4.2n.1 Sequence Name  R10E4.2n.1
Length (nt)  1239   Chromosome Location  III: 4277142-4279258
Chromosome . Primary Identifier  III Chromosome Location . Start  4277142
Chromosome Location . End  4279258 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10E4.2n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006331 sup-26 R10E4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10E4.2n R10E4.2n 1239   III: 4277142-4277380

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10E4.2n.1 4277142 4279258 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85205   239   III: 4277142-4277380 Caenorhabditis elegans
Exon85231   253   III: 4277852-4278104 Caenorhabditis elegans
Exon85249   507   III: 4278286-4278792 Caenorhabditis elegans
Exon85266   114   III: 4278934-4279047 Caenorhabditis elegans
Exon85274   126   III: 4279133-4279258 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10E4.2n.1 4277142 4279258 -1

1 Sequence

Length
1239

1 Sequence Ontology Term

Identifier Name Description
transcript