WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C28A5.4b Sequence Name  C28A5.4b
Length (nt)  849   Chromosome Location  III: 4446843-4447016
Chromosome . Primary Identifier  III Chromosome Location . Start  4446843
Chromosome Location . End  4447016
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28A5.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00677 CEH-43, isoform b 31.2 282 Caenorhabditis elegans
 

Other

54 RNAi

WormBase ID
WBRNAi00114159
WBRNAi00114237
WBRNAi00114039
WBRNAi00114118
WBRNAi00106764
WBRNAi00067956
WBRNAi00024659
WBRNAi00024660
WBRNAi00085861
WBRNAi00068815
WBRNAi00041390
WBRNAi00011286
WBRNAi00006771
WBRNAi00065477
WBRNAi00106741
WBRNAi00029290
WBRNAi00114274
WBRNAi00114197
WBRNAi00068755
WBRNAi00065478
WBRNAi00065479
WBRNAi00027192
WBRNAi00114001
WBRNAi00114080
WBRNAi00106756
WBRNAi00107175
WBRNAi00106776
WBRNAi00104517
WBRNAi00104522
WBRNAi00104523

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C28A5.4b 4446843 4447016 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C28A5.4b 4446843 4447016 -1
CDS:C28A5.4b 4447362 4447601 -1
CDS:C28A5.4b 4448972 4449047 -1
CDS:C28A5.4b 4449106 4449235 -1
CDS:C28A5.4b 4449715 4449943 -1

1 Sequence

Length
849

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C28A5.4b.1 C28A5.4b.1 1042   III: 4446650-4449943