WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38D4.6a.1 Sequence Name  C38D4.6a.1
Length (nt)  1317   Chromosome Location  III: 4804708-4808709
Chromosome . Primary Identifier  III Chromosome Location . Start  4804708
Chromosome Location . End  4808709 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38D4.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003912 pal-1 C38D4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38D4.6a C38D4.6a 813   III: 4805211-4805253

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38D4.6a.1 4804708 4808709 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86886   546   III: 4804708-4805253 Caenorhabditis elegans
Exon86888   172   III: 4806700-4806871 Caenorhabditis elegans
Exon86896   103   III: 4807046-4807148 Caenorhabditis elegans
Exon86899   288   III: 4807684-4807971 Caenorhabditis elegans
Exon86905   76   III: 4808026-4808101 Caenorhabditis elegans
Exon86909   132   III: 4808578-4808709 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38D4.6a.1 4804708 4808709 -1

1 Sequence

Length
1317

1 Sequence Ontology Term

Identifier Name Description
transcript