WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C38D4.6c Sequence Name  C38D4.6c
Length (nt)  669   Chromosome Location  III: 4805211-4805253
Chromosome . Primary Identifier  III Chromosome Location . Start  4805211
Chromosome Location . End  4805253
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38D4.6c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44166 PAL-1, isoform c 24.8 222 Caenorhabditis elegans
 

Other

76 RNAi

WormBase ID
WBRNAi00095522
WBRNAi00114286
WBRNAi00114051
WBRNAi00114130
WBRNAi00114209
WBRNAi00082742
WBRNAi00106570
WBRNAi00066939
WBRNAi00066966
WBRNAi00067021
WBRNAi00067156
WBRNAi00067181
WBRNAi00067251
WBRNAi00067313
WBRNAi00067337
WBRNAi00067405
WBRNAi00067435
WBRNAi00067440
WBRNAi00067658
WBRNAi00067738
WBRNAi00067812
WBRNAi00068118
WBRNAi00068137
WBRNAi00042160
WBRNAi00042161
WBRNAi00103906
WBRNAi00103905
WBRNAi00103908
WBRNAi00114247
WBRNAi00103907

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C38D4.6c 4805211 4805253 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003912 pal-1 C38D4.6 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C38D4.6c 4805211 4805253 -1
CDS:C38D4.6c 4806700 4806871 -1
CDS:C38D4.6c 4807046 4807142 -1
CDS:C38D4.6c 4807684 4807971 -1
CDS:C38D4.6c 4808026 4808094 -1

1 Sequence

Length
669

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C38D4.6c.1 C38D4.6c.1 1192   III: 4804688-4808094