WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52C9.1 Sequence Name  F52C9.1
Length (nt)  4149   Chromosome Location  III: 5326631-5326806
Chromosome . Primary Identifier  III Chromosome Location . Start  5326631
Chromosome Location . End  5326806
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52C9.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54107 SORF-2 158.3 1382 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00068093
WBRNAi00068163
WBRNAi00047946
WBRNAi00047947
WBRNAi00047948
WBRNAi00047949
WBRNAi00015385
WBRNAi00015386
WBRNAi00005579
WBRNAi00005728
WBRNAi00005798
WBRNAi00006684
WBRNAi00060458
WBRNAi00060457
WBRNAi00060459
WBRNAi00060460

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52C9.1 5326631 5326806 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018672 sorf-2 F52C9.1 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52C9.1 5326631 5326806 1
CDS:F52C9.1 5327221 5327946 1
CDS:F52C9.1 5328218 5328435 1
CDS:F52C9.1 5328525 5328673 1
CDS:F52C9.1 5328774 5328908 1
CDS:F52C9.1 5329297 5329434 1
CDS:F52C9.1 5329481 5329814 1
CDS:F52C9.1 5329859 5330361 1
CDS:F52C9.1 5330528 5330878 1
CDS:F52C9.1 5331099 5331257 1
CDS:F52C9.1 5331528 5331877 1
CDS:F52C9.1 5331934 5332056 1
CDS:F52C9.1 5332102 5332463 1
CDS:F52C9.1 5332587 5332693 1
CDS:F52C9.1 5333180 5333349 1
CDS:F52C9.1 5333396 5333543 1

1 Sequence

Length
4149

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52C9.1.1 F52C9.1.1 4234   III: 5326623-5333620