WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47D12.4b.1 Sequence Name  F47D12.4b.1
Length (nt)  1370   Chromosome Location  III: 6280421-6282414
Chromosome . Primary Identifier  III Chromosome Location . Start  6280421
Chromosome Location . End  6282414 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47D12.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001972 hmg-1.2 F47D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47D12.4b F47D12.4b 705   III: 6280606-6280677

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47D12.4b.1 6280421 6282414 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91865   257   III: 6280421-6280677 Caenorhabditis elegans
Exon91868   261   III: 6280982-6281242 Caenorhabditis elegans
Exon91870   80   III: 6281330-6281409 Caenorhabditis elegans
Exon91873   175   III: 6281592-6281766 Caenorhabditis elegans
Exon91875   597   III: 6281818-6282414 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47D12.4b.1 6280421 6282414 1

1 Sequence

Length
1370

1 Sequence Ontology Term

Identifier Name Description
transcript