WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F47D12.4b Sequence Name  F47D12.4b
Length (nt)  705   Chromosome Location  III: 6280606-6280677
Chromosome . Primary Identifier  III Chromosome Location . Start  6280606
Chromosome Location . End  6280677
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47D12.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28233 HMG-1.2, isoform b 27.2 234 Caenorhabditis elegans
 

Other

45 RNAi

WormBase ID
WBRNAi00092135
WBRNAi00067032
WBRNAi00067147
WBRNAi00067480
WBRNAi00067489
WBRNAi00067579
WBRNAi00067837
WBRNAi00068010
WBRNAi00068073
WBRNAi00068087
WBRNAi00068132
WBRNAi00064484
WBRNAi00064555
WBRNAi00047647
WBRNAi00091264
WBRNAi00025545
WBRNAi00092120
WBRNAi00064514
WBRNAi00064618
WBRNAi00064627
WBRNAi00064644
WBRNAi00064718
WBRNAi00064744
WBRNAi00064773
WBRNAi00064831
WBRNAi00076442
WBRNAi00005893
WBRNAi00092102
WBRNAi00071288
WBRNAi00068410

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F47D12.4b 6280606 6280677 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001972 hmg-1.2 F47D12.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F47D12.4b 6280606 6280677 1
CDS:F47D12.4b 6280982 6281242 1
CDS:F47D12.4b 6281330 6281409 1
CDS:F47D12.4b 6281592 6281766 1
CDS:F47D12.4b 6281818 6281934 1

1 Sequence

Length
705

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F47D12.4b.1 F47D12.4b.1 1370   III: 6280421-6282414