WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11H8.2a.1 Sequence Name  F11H8.2a.1
Length (nt)  1669   Chromosome Location  III: 7009136-7019584
Chromosome . Primary Identifier  III Chromosome Location . Start  7009136
Chromosome Location . End  7019584 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11H8.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017389 lgc-38 F11H8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11H8.2a F11H8.2a 1383   III: 7009241-7009300

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.2a.1 7009136 7019584 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94107   165   III: 7009136-7009300 Caenorhabditis elegans
Exon94109   62   III: 7009585-7009646 Caenorhabditis elegans
Exon94112   95   III: 7014309-7014403 Caenorhabditis elegans
Exon94114   68   III: 7015076-7015143 Caenorhabditis elegans
Exon94116   264   III: 7015195-7015458 Caenorhabditis elegans
Exon94118   39   III: 7015865-7015903 Caenorhabditis elegans
Exon94120   204   III: 7016097-7016300 Caenorhabditis elegans
Exon94122   88   III: 7016475-7016562 Caenorhabditis elegans
Exon94124   114   III: 7016610-7016723 Caenorhabditis elegans
Exon94126   96   III: 7016778-7016873 Caenorhabditis elegans
Exon94129   68   III: 7017357-7017424 Caenorhabditis elegans
Exon94131   141   III: 7019088-7019228 Caenorhabditis elegans
Exon94133   265   III: 7019320-7019584 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.2a.1 7009136 7019584 1

1 Sequence

Length
1669

1 Sequence Ontology Term

Identifier Name Description
transcript