WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F11H8.2a Sequence Name  F11H8.2a
Length (nt)  1383   Chromosome Location  III: 7009241-7009300
Chromosome . Primary Identifier  III Chromosome Location . Start  7009241
Chromosome Location . End  7009300
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11H8.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52928 LGC-38, isoform a 52.7 460 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00039918
WBRNAi00044418
WBRNAi00013151
WBRNAi00005510
WBRNAi00005699

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F11H8.2a 7009241 7009300 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017389 lgc-38 F11H8.2 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:F11H8.2a 7009241 7009300 1
CDS:F11H8.2a 7009585 7009646 1
CDS:F11H8.2a 7014309 7014403 1
CDS:F11H8.2a 7015076 7015143 1
CDS:F11H8.2a 7015195 7015458 1
CDS:F11H8.2a 7015865 7015903 1
CDS:F11H8.2a 7016097 7016300 1
CDS:F11H8.2a 7016475 7016562 1
CDS:F11H8.2a 7016610 7016723 1
CDS:F11H8.2a 7016778 7016873 1
CDS:F11H8.2a 7017357 7017424 1
CDS:F11H8.2a 7019088 7019228 1
CDS:F11H8.2a 7019320 7019403 1

1 Sequence

Length
1383

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F11H8.2a.1 F11H8.2a.1 1669   III: 7009136-7019584