WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK1236.3a Sequence Name  ZK1236.3a
Length (nt)  2442   Chromosome Location  III: 8418168-8418173
Chromosome . Primary Identifier  III Chromosome Location . Start  8418168
Chromosome Location . End  8418173
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1236.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54192 SOR-1, isoform a 91.7 813 Caenorhabditis elegans
 

Other

32 RNAi

WormBase ID
WBRNAi00009456
WBRNAi00065967
WBRNAi00065969
WBRNAi00002465
WBRNAi00059165
WBRNAi00027041
WBRNAi00066922
WBRNAi00065970
WBRNAi00099873
WBRNAi00065037
WBRNAi00076870
WBRNAi00100894
WBRNAi00099267
WBRNAi00099671
WBRNAi00099469
WBRNAi00001666
WBRNAi00087101
WBRNAi00087100
WBRNAi00087102
WBRNAi00065780
WBRNAi00100146
WBRNAi00100520
WBRNAi00100333
WBRNAi00065973
WBRNAi00087103
WBRNAi00087104
WBRNAi00087209
WBRNAi00065968
WBRNAi00065972
WBRNAi00065974

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK1236.3a 8418168 8418173 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023405 sor-1 ZK1236.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK1236.3a 8418168 8418173 1
CDS:ZK1236.3a 8419205 8419365 1
CDS:ZK1236.3a 8419579 8420857 1
CDS:ZK1236.3a 8420913 8421329 1
CDS:ZK1236.3a 8421793 8422320 1
CDS:ZK1236.3a 8422374 8422424 1

1 Sequence

Length
2442

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK1236.3a.1 ZK1236.3a.1 2672   III: 8418168-8422654