WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54F2.2c Sequence Name  F54F2.2c
Length (nt)  1908   Chromosome Location  III: 8802954-8803421
Chromosome . Primary Identifier  III Chromosome Location . Start  8802954
Chromosome Location . End  8803421
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54F2.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33653 ZFP-1, isoform c 66.5 635 Caenorhabditis elegans
 

Other

31 RNAi

WormBase ID
WBRNAi00048364
WBRNAi00048365
WBRNAi00081768
WBRNAi00027366
WBRNAi00025638
WBRNAi00064658
WBRNAi00064667
WBRNAi00064687
WBRNAi00015648
WBRNAi00113504
WBRNAi00005262
WBRNAi00006926
WBRNAi00081769
WBRNAi00081794
WBRNAi00081823
WBRNAi00081853
WBRNAi00024308
WBRNAi00069217
WBRNAi00081872
WBRNAi00078963
WBRNAi00078965
WBRNAi00078964
WBRNAi00062032
WBRNAi00092873
WBRNAi00081896
WBRNAi00081909
WBRNAi00081919
WBRNAi00069216
WBRNAi00069218
WBRNAi00069219

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54F2.2c 8802954 8803421 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006975 zfp-1 F54F2.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54F2.2c 8802954 8803421 1
CDS:F54F2.2c 8803567 8804110 1
CDS:F54F2.2c 8804284 8804872 1
CDS:F54F2.2c 8804921 8805053 1
CDS:F54F2.2c 8805452 8805625 1

1 Sequence

Length
1908

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54F2.2c.1 F54F2.2c.1 2812   III: 8799533-8806287
Transcript:F54F2.2c.2 F54F2.2c.2 2706   III: 8802819-8806288