WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078964 Phenotype Remark  RNAi of zfp-1 suppresses the embryonic lethality of hmp-2 RNAi. The authors suggest that this is due to silencing of the RNAi machinery by zfp-1 RNAi
Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001979 hmp-2 K05C4.6 Caenorhabditis elegans
WBGene00006975 zfp-1 F54F2.2 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05C4.6b K05C4.6b 2115   I: 14738882-14738937
CDS:F54F2.2c F54F2.2c 1908   III: 8802954-8803421
CDS:F54F2.2a F54F2.2a 2604   III: 8798555-8798663
CDS:K05C4.6a K05C4.6a 2037   I: 14739591-14739630

1 Laboratories

Primary Identifier
LP

1 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005193

0 Strain