WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23G5.1.2 Sequence Name  T23G5.1.2
Length (nt)  2633   Chromosome Location  III: 9225339-9228798
Chromosome . Primary Identifier  III Chromosome Location . Start  9225339
Chromosome Location . End  9228798 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23G5.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004391 rnr-1 T23G5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23G5.1 T23G5.1 2367   III: 9225521-9226100

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23G5.1.2 9225339 9228798 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99939   762   III: 9225339-9226100 Caenorhabditis elegans
Exon99942   651   III: 9226149-9226799 Caenorhabditis elegans
Exon99946   731   III: 9227022-9227752 Caenorhabditis elegans
Exon99948   279   III: 9227800-9228078 Caenorhabditis elegans
Exon99950   128   III: 9228123-9228250 Caenorhabditis elegans
Exon99951   82   III: 9228717-9228798 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23G5.1.2 9225339 9228798 -1

1 Sequence

Length
2633

1 Sequence Ontology Term

Identifier Name Description
transcript