WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54C8.7a.1 Sequence Name  F54C8.7a.1
Length (nt)  1346   Chromosome Location  III: 9451591-9453241
Chromosome . Primary Identifier  III Chromosome Location . Start  9451591
Chromosome Location . End  9453241 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C8.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010040 F54C8.7 F54C8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54C8.7a F54C8.7a 867   III: 9451842-9452165

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54C8.7a.1 9451591 9453241 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100430   575   III: 9451591-9452165 Caenorhabditis elegans
Exon100436   153   III: 9452222-9452374 Caenorhabditis elegans
Exon100442   289   III: 9452557-9452845 Caenorhabditis elegans
Exon100447   329   III: 9452913-9453241 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54C8.7a.1 9451591 9453241 -1

1 Sequence

Length
1346

1 Sequence Ontology Term

Identifier Name Description
transcript