WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54C8.7a Sequence Name  F54C8.7a
Length (nt)  867   Chromosome Location  III: 9451842-9452165
Chromosome . Primary Identifier  III Chromosome Location . Start  9451842
Chromosome Location . End  9452165
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C8.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28833 F54C8.7, isoform a 32.5 288 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00048266
WBRNAi00015589
WBRNAi00006144
WBRNAi00032759

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54C8.7a 9451842 9452165 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010040 F54C8.7 F54C8.7 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54C8.7a 9451842 9452165 -1
CDS:F54C8.7a 9452222 9452374 -1
CDS:F54C8.7a 9452557 9452845 -1
CDS:F54C8.7a 9452913 9453013 -1

1 Sequence

Length
867

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54C8.7a.1 F54C8.7a.1 1346   III: 9451591-9453241