WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16G12.6.1 Sequence Name  T16G12.6.1
Length (nt)  3047   Chromosome Location  III: 10069578-10076041
Chromosome . Primary Identifier  III Chromosome Location . Start  10069578
Chromosome Location . End  10076041 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16G12.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011807 T16G12.6 T16G12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16G12.6 T16G12.6 2850   III: 10069583-10069700

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16G12.6.1 10069578 10076041 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102369   123   III: 10069578-10069700 Caenorhabditis elegans
Exon102370   146   III: 10069913-10070058 Caenorhabditis elegans
Exon102371   188   III: 10070111-10070298 Caenorhabditis elegans
Exon102372   94   III: 10070345-10070438 Caenorhabditis elegans
Exon102373   167   III: 10070952-10071118 Caenorhabditis elegans
Exon102374   249   III: 10071175-10071423 Caenorhabditis elegans
Exon102375   390   III: 10071820-10072209 Caenorhabditis elegans
Exon102376   358   III: 10072740-10073097 Caenorhabditis elegans
Exon102377   132   III: 10073771-10073902 Caenorhabditis elegans
Exon102378   133   III: 10073950-10074082 Caenorhabditis elegans
Exon102380   293   III: 10074564-10074856 Caenorhabditis elegans
Exon102381   204   III: 10074905-10075108 Caenorhabditis elegans
Exon102382   239   III: 10075159-10075397 Caenorhabditis elegans
Exon102383   331   III: 10075711-10076041 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16G12.6.1 10069578 10076041 1

1 Sequence

Length
3047

1 Sequence Ontology Term

Identifier Name Description
transcript