WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y111B2A.22a Sequence Name  Y111B2A.22a
Length (nt)  7188   Chromosome Location  III: 12714588-12714868
Chromosome . Primary Identifier  III Chromosome Location . Start  12714588
Chromosome Location . End  12714868
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.22a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40241 SSL-1, isoform a 268.7 2395 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00055359
WBRNAi00055361
WBRNAi00055362
WBRNAi00066761
WBRNAi00075550
WBRNAi00065165
WBRNAi00036566
WBRNAi00065157
WBRNAi00063000
WBRNAi00065154
WBRNAi00075549
WBRNAi00065163
WBRNAi00065160
WBRNAi00066762

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.22a 12714588 12714868 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007027 ssl-1 Y111B2A.22 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.22a 12714588 12714868 1
CDS:Y111B2A.22a 12715510 12715614 1
CDS:Y111B2A.22a 12715671 12715899 1
CDS:Y111B2A.22a 12718007 12718792 1
CDS:Y111B2A.22a 12719442 12720074 1
CDS:Y111B2A.22a 12721272 12722102 1
CDS:Y111B2A.22a 12723287 12723771 1
CDS:Y111B2A.22a 12725798 12726752 1
CDS:Y111B2A.22a 12727230 12727313 1
CDS:Y111B2A.22a 12727383 12727526 1
CDS:Y111B2A.22a 12732466 12732688 1
CDS:Y111B2A.22a 12734036 12734322 1
CDS:Y111B2A.22a 12735248 12735758 1
CDS:Y111B2A.22a 12737671 12738405 1
CDS:Y111B2A.22a 12739984 12740231 1
CDS:Y111B2A.22a 12741823 12742049 1
CDS:Y111B2A.22a 12743506 12743929 1

1 Sequence

Length
7188

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y111B2A.22a.1 Y111B2A.22a.1 8002   III: 12714566-12744721