WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55F3C.3g Sequence Name  Y55F3C.3g
Length (nt)  1536   Chromosome Location  IV: 748707-748738
Chromosome . Primary Identifier  IV Chromosome Location . Start  748707
Chromosome Location . End  748738
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3C.3g

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48607 KVS-5, isoform g 58.2 511 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00002374
WBRNAi00057555
WBRNAi00021057

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y55F3C.3g 748707 748738 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021948 kvs-5 Y55F3C.3 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y55F3C.3g 748707 748738 1
CDS:Y55F3C.3g 748813 748914 1
CDS:Y55F3C.3g 748969 749138 1
CDS:Y55F3C.3g 749514 749607 1
CDS:Y55F3C.3g 749791 749971 1
CDS:Y55F3C.3g 750200 750292 1
CDS:Y55F3C.3g 751088 751288 1
CDS:Y55F3C.3g 751583 751684 1
CDS:Y55F3C.3g 751872 752064 1
CDS:Y55F3C.3g 752115 752277 1
CDS:Y55F3C.3g 752679 752805 1
CDS:Y55F3C.3g 752851 752928 1

1 Sequence

Length
1536

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55F3C.3g.1 Y55F3C.3g.1 1903   IV: 748707-753295