WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G12.8b.1 Sequence Name  C09G12.8b.1
Length (nt)  1661   Chromosome Location  IV: 3506328-3509527
Chromosome . Primary Identifier  IV Chromosome Location . Start  3506328
Chromosome Location . End  3509527 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G12.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000424 ced-10 C09G12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G12.8b C09G12.8b 576   IV: 3507379-3507571

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G12.8b.1 3506328 3509527 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117097   1244   IV: 3506328-3507571 Caenorhabditis elegans
Exon117099   186   IV: 3508056-3508241 Caenorhabditis elegans
Exon117101   92   IV: 3508509-3508600 Caenorhabditis elegans
Exon117104   139   IV: 3509389-3509527 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G12.8b.1 3506328 3509527 -1

1 Sequence

Length
1661

1 Sequence Ontology Term

Identifier Name Description
transcript