WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C09G12.8b Sequence Name  C09G12.8b
Length (nt)  576   Chromosome Location  IV: 3507379-3507571
Chromosome . Primary Identifier  IV Chromosome Location . Start  3507379
Chromosome Location . End  3507571
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G12.8b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16833 CED-10, isoform b 21.4 191 Caenorhabditis elegans
 

Other

46 RNAi

WormBase ID
WBRNAi00107897
WBRNAi00091307
WBRNAi00107684
WBRNAi00078690
WBRNAi00078691
WBRNAi00040224
WBRNAi00091305
WBRNAi00073507
WBRNAi00073508
WBRNAi00072240
WBRNAi00078693
WBRNAi00078694
WBRNAi00010543
WBRNAi00094827
WBRNAi00109614
WBRNAi00108424
WBRNAi00027610
WBRNAi00075652
WBRNAi00109226
WBRNAi00073506
WBRNAi00073509
WBRNAi00073511
WBRNAi00073510
WBRNAi00072241
WBRNAi00072242
WBRNAi00075650
WBRNAi00075654
WBRNAi00065786
WBRNAi00109323
WBRNAi00113813

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C09G12.8b 3507379 3507571 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000424 ced-10 C09G12.8 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:C09G12.8b 3507379 3507571 -1
CDS:C09G12.8b 3508056 3508241 -1
CDS:C09G12.8b 3508509 3508600 -1
CDS:C09G12.8b 3509389 3509493 -1

1 Sequence

Length
576

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C09G12.8b.1 C09G12.8b.1 1661   IV: 3506328-3509527