WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:W02C12.3b.1 Sequence Name  W02C12.3b.1
Length (nt)  2499   Chromosome Location  IV: 4014801-4028127
Chromosome . Primary Identifier  IV Chromosome Location . Start  4014801
Chromosome Location . End  4028127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02C12.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020930 hlh-30 W02C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02C12.3b W02C12.3b 1500   IV: 4015759-4015929

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.3b.1 4014801 4028127 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118193   1129   IV: 4014801-4015929 Caenorhabditis elegans
Exon118201   77   IV: 4016492-4016568 Caenorhabditis elegans
Exon118214   151   IV: 4016634-4016784 Caenorhabditis elegans
Exon118226   289   IV: 4016834-4017122 Caenorhabditis elegans
Exon118239   76   IV: 4017559-4017634 Caenorhabditis elegans
Exon118252   145   IV: 4017693-4017837 Caenorhabditis elegans
Exon118265   129   IV: 4018033-4018161 Caenorhabditis elegans
Exon118287   96   IV: 4018487-4018582 Caenorhabditis elegans
Exon118301   186   IV: 4026878-4027063 Caenorhabditis elegans
Exon118309   221   IV: 4027907-4028127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.3b.1 4014801 4028127 -1

1 Sequence

Length
2499

1 Sequence Ontology Term

Identifier Name Description
transcript