WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46G7.4r.1 Sequence Name  C46G7.4r.1
Length (nt)  3360   Chromosome Location  IV: 6019978-6033639
Chromosome . Primary Identifier  IV Chromosome Location . Start  6019978
Chromosome Location . End  6033639 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46G7.4r.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004112 pqn-22 C46G7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46G7.4r C46G7.4r 3360   IV: 6019978-6020187

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46G7.4r.1 6019978 6033639 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124684   210   IV: 6019978-6020187 Caenorhabditis elegans
Exon124707   246   IV: 6020944-6021189 Caenorhabditis elegans
Exon124731   159   IV: 6021590-6021748 Caenorhabditis elegans
Exon124752   174   IV: 6021984-6022157 Caenorhabditis elegans
Exon124772   81   IV: 6022205-6022285 Caenorhabditis elegans
Exon124794   114   IV: 6022940-6023053 Caenorhabditis elegans
Exon124809   63   IV: 6023227-6023289 Caenorhabditis elegans
Exon124820   75   IV: 6023337-6023411 Caenorhabditis elegans
Exon124831   132   IV: 6023454-6023585 Caenorhabditis elegans
Exon124837   57   IV: 6023795-6023851 Caenorhabditis elegans
Exon124858   338   IV: 6024450-6024787 Caenorhabditis elegans
Exon124882   82   IV: 6026328-6026409 Caenorhabditis elegans
Exon124903   105   IV: 6026576-6026680 Caenorhabditis elegans
Exon124926   90   IV: 6027074-6027163 Caenorhabditis elegans
Exon124942   111   IV: 6027414-6027524 Caenorhabditis elegans
Exon124972   282   IV: 6029157-6029438 Caenorhabditis elegans
Exon124990   621   IV: 6030081-6030701 Caenorhabditis elegans
Exon125007   112   IV: 6030974-6031085 Caenorhabditis elegans
Exon125025   125   IV: 6031495-6031619 Caenorhabditis elegans
Exon125041   183   IV: 6033457-6033639 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46G7.4r.1 6019978 6033639 -1

1 Sequence

Length
3360

1 Sequence Ontology Term

Identifier Name Description
transcript