WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6BL.18a.3 Sequence Name  Y73B6BL.18a.3
Length (nt)  3720   Chromosome Location  IV: 6362406-6373093
Chromosome . Primary Identifier  IV Chromosome Location . Start  6362406
Chromosome Location . End  6373093 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BL.18a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004881 smg-3 Y73B6BL.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6BL.18a Y73B6BL.18a 3429   IV: 6365405-6365453

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.18a.3 6362406 6373093 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126645   249   IV: 6362406-6362654 Caenorhabditis elegans
Exon126661   85   IV: 6365369-6365453 Caenorhabditis elegans
Exon126665   346   IV: 6365505-6365850 Caenorhabditis elegans
Exon126672   79   IV: 6368130-6368208 Caenorhabditis elegans
Exon126679   142   IV: 6368573-6368714 Caenorhabditis elegans
Exon126687   101   IV: 6369013-6369113 Caenorhabditis elegans
Exon126693   142   IV: 6369172-6369313 Caenorhabditis elegans
Exon126699   375   IV: 6369787-6370161 Caenorhabditis elegans
Exon126705   347   IV: 6370595-6370941 Caenorhabditis elegans
Exon126711   873   IV: 6370993-6371865 Caenorhabditis elegans
Exon126717   93   IV: 6371910-6372002 Caenorhabditis elegans
Exon126723   230   IV: 6372055-6372284 Caenorhabditis elegans
Exon126729   212   IV: 6372334-6372545 Caenorhabditis elegans
Exon126735   179   IV: 6372601-6372779 Caenorhabditis elegans
Exon126743   267   IV: 6372827-6373093 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.18a.3 6362406 6373093 -1

1 Sequence

Length
3720

1 Sequence Ontology Term

Identifier Name Description
transcript