WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y73B6BL.19 Sequence Name  Y73B6BL.19
Length (nt)  1737   Chromosome Location  IV: 6378759-6378836
Chromosome . Primary Identifier  IV Chromosome Location . Start  6378759
Chromosome Location . End  6378836
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BL.19

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46429 SHL-1 66.4 578 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00058317
WBRNAi00086318
WBRNAi00086317
WBRNAi00086080
WBRNAi00086321

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y73B6BL.19 6378759 6378836 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022240 shl-1 Y73B6BL.19 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y73B6BL.19 6378759 6378836 -1
CDS:Y73B6BL.19 6378886 6378967 -1
CDS:Y73B6BL.19 6379575 6379767 -1
CDS:Y73B6BL.19 6380169 6380271 -1
CDS:Y73B6BL.19 6380360 6380536 -1
CDS:Y73B6BL.19 6380804 6381019 -1
CDS:Y73B6BL.19 6381126 6381234 -1
CDS:Y73B6BL.19 6381803 6382251 -1
CDS:Y73B6BL.19 6383090 6383317 -1
CDS:Y73B6BL.19 6383881 6383982 -1

1 Sequence

Length
1737

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y73B6BL.19.1 Y73B6BL.19.1 2299   IV: 6378285-6384070