WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK381.4a Sequence Name  ZK381.4a
Length (nt)  2193   Chromosome Location  IV: 6974617-6975006
Chromosome . Primary Identifier  IV Chromosome Location . Start  6974617
Chromosome Location . End  6975006
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK381.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25689 PGL-1, isoform a 78.4 730 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00059393
WBRNAi00084334
WBRNAi00113912
WBRNAi00007860
WBRNAi00021989
WBRNAi00084326
WBRNAi00069464
WBRNAi00084341
WBRNAi00027792

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK381.4a 6974617 6975006 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003992 pgl-1 ZK381.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK381.4a 6974617 6975006 -1
CDS:ZK381.4a 6975051 6975574 -1
CDS:ZK381.4a 6975619 6975790 -1
CDS:ZK381.4a 6975837 6975979 -1
CDS:ZK381.4a 6976026 6976366 -1
CDS:ZK381.4a 6976415 6976773 -1
CDS:ZK381.4a 6976818 6976964 -1
CDS:ZK381.4a 6977012 6977128 -1

1 Sequence

Length
2193

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK381.4a.2 ZK381.4a.2 2423   IV: 6974441-6977249
Transcript:ZK381.4a.1 ZK381.4a.1 2383   IV: 6974442-6977143