WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK381.4b.1 Sequence Name  ZK381.4b.1
Length (nt)  2316   Chromosome Location  IV: 6974617-6977318
Chromosome . Primary Identifier  IV Chromosome Location . Start  6974617
Chromosome Location . End  6977318 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK381.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003992 pgl-1 ZK381.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK381.4b ZK381.4b 2316   IV: 6974617-6975006

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK381.4b.1 6974617 6977318 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128634   390   IV: 6974617-6975006 Caenorhabditis elegans
Exon128637   524   IV: 6975051-6975574 Caenorhabditis elegans
Exon128640   172   IV: 6975619-6975790 Caenorhabditis elegans
Exon128643   143   IV: 6975837-6975979 Caenorhabditis elegans
Exon128646   341   IV: 6976026-6976366 Caenorhabditis elegans
Exon128649   359   IV: 6976415-6976773 Caenorhabditis elegans
Exon128652   147   IV: 6976818-6976964 Caenorhabditis elegans
Exon128655   132   IV: 6977012-6977143 Caenorhabditis elegans
Exon128657   108   IV: 6977211-6977318 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK381.4b.1 6974617 6977318 -1

1 Sequence

Length
2316

1 Sequence Ontology Term

Identifier Name Description
transcript